Assay Detail
Binding
CHEMBL3889253
Review assay metadata, readout intent, target linkage, and publication context from the same page.
Homogeneous Time Resolved-fluorescence Resonance Energy Transfer (TR-FRET) Assay: LRRK2 kinase activity is measured using a LanthaScreen kinase activity assay available from Invitrogen (Life Technologies Corporation). The assay is a homogeneous time resolved-fluorescence resonance energy transfer (TR-FRET) assay that measures phosphorylation of a fluorescein-labelled peptide substrate (fluorescein-LRRKtide, fluorescein-GAGRLGRDKYKTLRQIRQ) (SEQ ID NO 1) as a result of LRRK2 kinase activity. The phosphorylated peptide is recognized by a terbium-labelled phospho-specific anti-LRRKtide antibody and, subsequently, the phosphorylated LRRKtide can be quantified by the extent of TR-FRET between the terbium donor and fluorescein acceptor.The LRRK2 kinase is obtained from Invitrogen (Life Technologies Corporation) and comprises residues 970 to 2527 of the full length human wild-type LRRK2 kinase or a similar sequence with the G2019S mutation. As discussed above, this mutation increases the kinase activity relative to the wild-type. The kinase reactions are performed in a 20 uL volume in 384-well plates. The kinase reaction buffer consists of 50 mM Tris pH 8.5, 0.01% BRIJ-35, 10 mM MgCl2, 1 mM EGTA, and 2 mM DTT. In the assay, 1 nM LRRK2 WT or 250 pM LRRK2 G2019S kinase is incubated with the test compound (typically at 0 to 30 uM) for 30 minutes before the kinase reaction is initiated by addition of 1.3 mM ATP and 0.4 uM fluorescein-LRRKtide. The reaction mixture (20 ul total volume) is incubated for 2 hours at 30° C. before the reaction is terminated by addition of 10 mM EDTA and 1 nM terbium-labelled anti-phospho-LRRKtide antibody (final volume 20 ul). The mixture is further incubated for 30 minutes at RT. TR-FRET is measured by excitation of the terbium-donor with 340 nm light and subsequent (delay time 100 us) measurement of terbium and fluorescein emission at 495 nm and 520 nm, respectively, over a time window of 1000 us. The measurement is repeated 10 times for fluorescein and 10 times for terbium emission with a 2000 us time window between repeats. TR-FRET measurements are performed on a Biomek Synergy plate. The TR-FRET signal is calculated as the emission-ratio at 520 nm over 495 nm.
23
Total Activities
23
Compounds Tested
1
Activity Types
0
Assay Parameters
Assay Information
| Assay Type | Binding |
| Organism | Homo sapiens |
| Confidence | 8 — Homologous single protein target |
| Curated By | Autocuration |
Target
Leucine-rich repeat serine/threonine-protein kinase 2 (CHEMBL1075104) ↗| Type | SINGLE PROTEIN |
| Organism | Homo sapiens |
Publication
Arylpyrrolopyridine derived compounds as LRRK2 inhibitors
Activity Statistics
| Type | Count | Avg pChEMBL | Best pChEMBL |
|---|---|---|---|
| IC50 | 23 | 6.78 | 9.00 |
Compounds Tested
| Compound | Name | Phase | Activities | Best pChEMBL |
|---|---|---|---|---|
| CHEMBL3969077 | — | — | 1 | 9.00 |
| CHEMBL3980700 | — | — | 1 | 8.40 |
| CHEMBL3961632 | — | — | 1 | 7.82 |
| CHEMBL3933899 | — | — | 1 | 7.57 |
| CHEMBL3961481 | — | — | 1 | 7.44 |
| CHEMBL3939513 | — | — | 1 | 7.32 |
| CHEMBL3907032 | — | — | 1 | 7.01 |
| CHEMBL3930527 | — | — | 1 | 6.84 |
| CHEMBL3967289 | — | — | 1 | 6.83 |
| CHEMBL3912951 | — | — | 1 | 6.77 |
| CHEMBL3919862 | — | — | 1 | 6.67 |
| CHEMBL3896115 | — | — | 1 | 6.67 |
| CHEMBL3979676 | — | — | 1 | 6.61 |
| CHEMBL3959637 | — | — | 1 | 6.58 |
| CHEMBL3925092 | — | — | 1 | 6.47 |
| CHEMBL3939512 | — | — | 1 | 6.45 |
| CHEMBL3905887 | — | — | 1 | 6.41 |
| CHEMBL3949880 | — | — | 1 | 6.26 |
| CHEMBL3975772 | — | — | 1 | 6.21 |
| CHEMBL3937634 | — | — | 1 | 6.04 |
| CHEMBL3928607 | — | — | 1 | 5.89 |
| CHEMBL3923178 | — | — | 1 | 5.41 |
| CHEMBL3950909 | — | — | 1 | 5.26 |
Activity Data
| Compound | Name | Type | Rel. | Value | Units | pChEMBL |
|---|---|---|---|---|---|---|
| CHEMBL3969077 | — | IC50 | = | 1.0 | nM | 9.00 |
| CHEMBL3980700 | — | IC50 | = | 4.0 | nM | 8.40 |
| CHEMBL3961632 | — | IC50 | = | 15.0 | nM | 7.82 |
| CHEMBL3933899 | — | IC50 | = | 27.0 | nM | 7.57 |
| CHEMBL3961481 | — | IC50 | = | 36.0 | nM | 7.44 |
| CHEMBL3939513 | — | IC50 | = | 48.0 | nM | 7.32 |
| CHEMBL3907032 | — | IC50 | = | 97.0 | nM | 7.01 |
| CHEMBL3930527 | — | IC50 | = | 145.0 | nM | 6.84 |
| CHEMBL3967289 | — | IC50 | = | 149.0 | nM | 6.83 |
| CHEMBL3912951 | — | IC50 | = | 170.0 | nM | 6.77 |
| CHEMBL3919862 | — | IC50 | = | 215.0 | nM | 6.67 |
| CHEMBL3896115 | — | IC50 | = | 216.0 | nM | 6.67 |
| CHEMBL3979676 | — | IC50 | = | 247.0 | nM | 6.61 |
| CHEMBL3959637 | — | IC50 | = | 266.0 | nM | 6.58 |
| CHEMBL3925092 | — | IC50 | = | 340.0 | nM | 6.47 |
| CHEMBL3939512 | — | IC50 | = | 358.0 | nM | 6.45 |
| CHEMBL3905887 | — | IC50 | = | 393.0 | nM | 6.41 |
| CHEMBL3949880 | — | IC50 | = | 549.0 | nM | 6.26 |
| CHEMBL3975772 | — | IC50 | = | 620.0 | nM | 6.21 |
| CHEMBL3937634 | — | IC50 | = | 919.0 | nM | 6.04 |
| CHEMBL3928607 | — | IC50 | = | 1279.0 | nM | 5.89 |
| CHEMBL3923178 | — | IC50 | = | 3868.0 | nM | 5.41 |
| CHEMBL3950909 | — | IC50 | = | 5442.0 | nM | 5.26 |