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Compound Detail

CHEMBL3098689

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O=C(CCCCC[C@H](NC(=O)[C@@H]1CCCC(=O)N1)C(=O)Nc1ccccc1)NO
ChEMBL ↗ Properties Compare Identifier

Basic Information

ChEMBL ID CHEMBL3098689
Phase Preclinical
Structure Type MOL
InChI Key HFFOCGFIJMCQCW-HOTGVXAUSA-N
8
Targets
8
Activities
1
Assay Types
0
PK Parameters
8
Publications
0
Known Names

Molecular Properties

404.5
MW (Da)
1.23
ALogP
5
HBA
5
HBD
136.6
PSA (Ų)
0.23
QED
0
Ro5 Violations
10
Rot. Bonds

Drug Information

Molecule Type Small molecule
Availability Unknown
Chirality Unknown

Flags

First in Class Prodrug

Extended Properties

Molecular Formula C20H28N4O5
MW 404.47
Aromatic Rings 1
Heavy Atoms 29
NP-Likeness -0.31

Activity Summary

IC50 8 meas. best 8.3

Target Activity Profile

Target Type Best pChEMBL Mean pChEMBL Best (nM) # Data
Histone deacetylase 6
CHEMBL1865
 IC50 8.3 8.3 5.0 1
Histone deacetylase 3/Nuclear receptor corepressor 2 (HDAC3/NCoR2)
CHEMBL2111363
 IC50 7.7 7.7 20.0 1
Histone deacetylase 1
CHEMBL325
 IC50 7.6 7.6 25.0 1
Histone deacetylase 11
CHEMBL3310
 IC50 7.33 7.33 47.0 1
Polyamine deacetylase HDAC10
CHEMBL5103
 IC50 7.29 7.29 51.0 1
Histone deacetylase 2
CHEMBL1937
 IC50 7.05 7.05 89.0 1
Histone deacetylase 8
CHEMBL3192
 IC50 7.01 7.01 97.0 1
NON-PROTEIN TARGET
CHEMBL3879801
 IC50 5.6 5.6 2500.0 1

Activity Data Samples

Top measurements by pChEMBL value

Target Type Rel. Value Units pChEMBL Assay PubMed
Histone deacetylase 6 IC50 = 5.0 nM 8.3 Inhibition of human HDAC6 using RHKK(Ac) as substrate by fluorimetric analysis 24345446
Histone deacetylase 3/Nuclear receptor corepressor 2 (HDAC3/NCoR2) IC50 = 20.0 nM 7.7 Inhibition of human HDAC3/NCOR2 using RHKK(Ac) as substrate by fluorimetric anal... 24345446
Histone deacetylase 1 IC50 = 25.0 nM 7.6 Inhibition of human HDAC1 using RHKK(Ac) as substrate by fluorimetric analysis 24345446
Histone deacetylase 11 IC50 = 47.0 nM 7.33 Inhibition of human HDAC11 using RHKK(Ac) as substrate by fluorimetric analysis 24345446
Polyamine deacetylase HDAC10 IC50 = 51.0 nM 7.29 Inhibition of human HDAC10 using RHKK(Ac) as substrate by fluorimetric analysis 24345446
Histone deacetylase 2 IC50 = 89.0 nM 7.05 Inhibition of human HDAC2 using RHKK(Ac) as substrate by fluorimetric analysis 24345446
Histone deacetylase 8 IC50 = 97.0 nM 7.01 Inhibition of human HDAC8 using RHK(Ac)K(Ac) as substrate by fluorimetric analys... 24345446
NON-PROTEIN TARGET IC50 = 2500.0 nM 5.6 Cytotoxicity against human H460 cells 24345446

Literature References

PubMed DOI Target Context # Activities
24345446 10.1016/j.bmcl.2013.11.072 NON-PROTEIN TARGET 1
24345446 10.1016/j.bmcl.2013.11.072 Histone deacetylase 11 1
24345446 10.1016/j.bmcl.2013.11.072 Polyamine deacetylase HDAC10 1
24345446 10.1016/j.bmcl.2013.11.072 Histone deacetylase 8 1
24345446 10.1016/j.bmcl.2013.11.072 Histone deacetylase 6 1
24345446 10.1016/j.bmcl.2013.11.072 Histone deacetylase 3/Nuclear receptor corepressor 2 (HDAC3/NCoR2) 1
24345446 10.1016/j.bmcl.2013.11.072 Histone deacetylase 2 1
24345446 10.1016/j.bmcl.2013.11.072 Histone deacetylase 1 1

Data from ChEMBL 36 via Core Engine