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Assay Detail

CHEMBL5738357

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Binding
Proximity Ligation Assay: Isolated cardiomyocytes were washed twice in PBS at room temperature, transferred to 4% paraformaldehyde (PFA) and gently shaken for 30 min, then washed twice again in PBS. The cardiomyocyte suspension was next transferred to 0.8 cm2 wells, each coated with 8 μg laminin (Invitrogen), and incubated at 37° C. for 2 h. PBS was replaced by 0.1% Triton X100 in PBS, and incubated for 10 min at 37° C. Proximity ligation assay was then performed with the Duolink II proprietary system (Olink Bioscience, Uppsala, Sweden), according to the manufacturer's protocol (Soderberg, O., et al., Direct observation of individual endogenous protein complexes in situ by proximity ligation. Nat Methods, 2006. 3(12): 995-1000).Cardiomyocytes were scanned on a Zeiss LSM 710 confocal microscope (excitation 543 nm HeNe laser, through a MBS 488/543 dichroic mirror, emission collected at 565-589 nm). ImageJ 1.44p software (http://imagej.nih.gov/ij) was used for analysis of single-cell intracellular fluorescence intensity by measuring whole cell mean gray value. Results were corrected for background fluorescence signal.
90
Total Activities
30
Compounds Tested
4
Activity Types
0
Assay Parameters

Assay Information

Assay Type Binding
Confidence 8 — Homologous single protein target
Curated By Autocuration

Target

cGMP-dependent 3',5'-cyclic phosphodiesterase (CHEMBL2652)
Type SINGLE PROTEIN
Organism Homo sapiens

Publication

Treatment of tachycardia
(2022)

Activity Statistics

Type Count Avg pChEMBL Best pChEMBL
kon 30 - -
k_off 30 - -
IC50 28 8.31 9.54
Ki 2 7.32 7.70

Compounds Tested

Compound Name Phase Activities Best pChEMBL
CHEMBL2313247 3 9.54
CHEMBL4060569 TAK-915 1.0 3 9.21
CHEMBL5868732 3 8.82
CHEMBL3092562 PF-05180999 1.0 3 8.79
CHEMBL4087945 3 8.70
CHEMBL2381192 3 8.64
CHEMBL3427725 3 8.52
CHEMBL5817555 3 8.52
CHEMBL4087412 3 8.52
CHEMBL2387430 3 8.48
CHEMBL5269828 3 8.38
CHEMBL5774346 3 8.38
CHEMBL370962 3 8.33
CHEMBL3693303 3 8.30
CHEMBL5274203 3 8.29
CHEMBL5987640 3 8.27
CHEMBL6061671 3 8.27
CHEMBL5918385 3 8.22
CHEMBL5818033 3 8.15
CHEMBL4074744 3 8.10
CHEMBL3331517 3 8.10
CHEMBL3331521 3 8.00
CHEMBL5959294 3 7.96
CHEMBL3693332 3 7.92
CHEMBL3425540 3 7.82
CHEMBL6031865 3 7.70
CHEMBL4059831 3 7.62
CHEMBL3092559 3 7.54
CHEMBL3425539 3 7.27
CHEMBL3092565 3 6.94

Activity Data

Compound Name Type Rel. Value Units pChEMBL
CHEMBL2313247 IC50 = 0.29 nM 9.54
CHEMBL4060569 TAK-915 IC50 = 0.61 nM 9.21
CHEMBL5868732 IC50 = 1.5 nM 8.82
CHEMBL3092562 PF-05180999 IC50 = 1.61 nM 8.79
CHEMBL4087945 IC50 = 2.0 nM 8.70
CHEMBL2381192 IC50 = 2.3 nM 8.64
CHEMBL3427725 IC50 = 3.0 nM 8.52
CHEMBL4087412 IC50 = 3.0 nM 8.52
CHEMBL5817555 IC50 = 3.0 nM 8.52
CHEMBL2387430 IC50 = 3.3 nM 8.48
CHEMBL5269828 IC50 = 4.12 nM 8.38
CHEMBL5774346 IC50 = 4.2 nM 8.38
CHEMBL370962 IC50 = 4.7 nM 8.33
CHEMBL3693303 IC50 = 5.0 nM 8.30
CHEMBL5274203 IC50 = 5.1 nM 8.29
CHEMBL6061671 IC50 = 5.4 nM 8.27
CHEMBL5987640 IC50 = 5.4 nM 8.27
CHEMBL5918385 IC50 = 6.0 nM 8.22
CHEMBL5818033 IC50 = 7.12 nM 8.15
CHEMBL4074744 IC50 = 8.0 nM 8.10
CHEMBL3331517 IC50 = 8.0 nM 8.10
CHEMBL3331521 IC50 = 10.0 nM 8.00
CHEMBL5959294 IC50 = 11.0 nM 7.96
CHEMBL3693332 IC50 = 12.0 nM 7.92
CHEMBL3425540 IC50 = 15.0 nM 7.82
CHEMBL6031865 Ki = 20.0 nM 7.70
CHEMBL4059831 IC50 = 24.0 nM 7.62
CHEMBL3092559 IC50 = 29.0 nM 7.54
CHEMBL3425539 IC50 = 54.0 nM 7.27
CHEMBL3092565 Ki = 114.0 nM 6.94
CHEMBL3425539 k_off = - s-1 -
CHEMBL4074744 k_off = - s-1 -
CHEMBL4074744 kon = - -
CHEMBL5774346 kon = - -
CHEMBL5774346 k_off = - s-1 -
CHEMBL5868732 k_off = - s-1 -
CHEMBL5868732 kon = - -
CHEMBL3092565 k_off = - s-1 -
CHEMBL3092559 kon = - -
CHEMBL3092565 kon = - -
CHEMBL4059831 k_off = - s-1 -
CHEMBL5959294 kon = - -
CHEMBL3092559 k_off = - s-1 -
CHEMBL3425539 kon = - -
CHEMBL5959294 k_off = - s-1 -
CHEMBL4059831 kon = - -
CHEMBL3427725 k_off = - s-1 -
CHEMBL5274203 kon = - -
CHEMBL3427725 kon = - -
CHEMBL5274203 k_off = - s-1 -