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Compound Detail

CHEMBL504425

GNIDILATIDIN
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C=C(C)[C@@]12O[C@@]3(/C=C/C=C/CCCCC)O[C@@H]1[C@@H]1[C@@H]4O[C@]4(CO)[C@@H](O)[C@]4(O)C(=O)C(C)=C[C@H]4[C@@]1(O3)[C@H](C)[C@H]2OC(=O)c1ccccc1
ChEMBL ↗ Properties Compare Identifier

Basic Information

ChEMBL ID CHEMBL504425
Name GNIDILATIDIN
Phase Preclinical
Structure Type MOL
InChI Key CGSGRJNIABXQJQ-NSCQCFIPSA-N
15
Targets
15
Activities
2
Assay Types
0
PK Parameters
19
Publications
0
Known Names

Molecular Properties

648.8
MW (Da)
3.70
ALogP
10
HBA
3
HBD
144.3
PSA (Ų)
0.11
QED
1
Ro5 Violations
10
Rot. Bonds

Drug Information

Molecule Type Small molecule
Availability Unknown
Chirality Unknown

Flags

Natural Product First in Class Prodrug

Extended Properties

Molecular Formula C37H44O10
MW 648.75
Aromatic Rings 1
Heavy Atoms 47
NP-Likeness 3.25

Activity Summary

IC50 14 meas. best 8.92
EC50 1 meas. best 8.72

Target Activity Profile

Target Type Best pChEMBL Mean pChEMBL Best (nM) # Data
Human immunodeficiency virus 1
CHEMBL378
 IC50 8.92 8.92 1.2 1
Human immunodeficiency virus
CHEMBL613758
 EC50 8.72 8.72 1.9 1
B16
CHEMBL381
 IC50 6.8 6.8 160.0 1
HT-1080
CHEMBL614580
 IC50 5.7 5.7 2020.0 1
MCF7
CHEMBL387
 IC50 5.62 5.62 2390.0 1
SW-620
CHEMBL612262
 IC50 5.37 5.37 4300.0 1
HeLa
CHEMBL399
 IC50 5.25 5.25 5560.0 1
RKO
CHEMBL614879
 IC50 5.19 5.19 6500.0 1
HepG2
CHEMBL395
 IC50 5.09 5.09 8040.0 1
NON-PROTEIN TARGET
CHEMBL3879801
 IC50 5.06 5.06 8720.0 1
U-937
CHEMBL612794
 IC50 4.93 4.93 11790.0 1
A549
CHEMBL392
 IC50 4.88 4.88 13110.0 1
K562
CHEMBL385
 IC50 4.79 4.79 16080.0 1
HCT-116
CHEMBL394
 IC50 4.64 4.64 22960.0 1
HL-60
CHEMBL383
 IC50 4.57 4.57 26810.0 1

Activity Data Samples

Top measurements by pChEMBL value

Target Type Rel. Value Units pChEMBL Assay PubMed
Human immunodeficiency virus 1 IC50 = 1.2 nM 8.92 Antiviral activity against HIV1 NL4-3 infected in human MT4 cells measured on da... 31860304
Human immunodeficiency virus EC50 = 1.9 nM 8.72 Antiviral activity against HIV NL4-3 infected in human MT4 cells assessed as sup... 32997496
B16 IC50 = 160.0 nM 6.8 Inhibition of melanin production in alpha-MSH stimulated mouse B16 cells after 7... 23623417
HT-1080 IC50 = 2020.0 nM 5.7 Cytotoxicity against human HT1080 cells after 48 hrs by MTT assay 23558238
MCF7 IC50 = 2390.0 nM 5.62 Cytotoxicity against human MCF7 cells after 48 hrs by MTT assay 23558238
SW-620 IC50 = 4300.0 nM 5.37 Cytotoxicity against human SW620 cells after 24 hrs by MTT assay 32223193
HeLa IC50 = 5560.0 nM 5.25 Cytotoxicity against human HeLa cells after 48 hrs by MTT assay 23558238
RKO IC50 = 6500.0 nM 5.19 Cytotoxicity against human RKO cells after 24 hrs by MTT assay 32223193
HepG2 IC50 = 8040.0 nM 5.09 Cytotoxicity against human HepG2 cells after 48 hrs by MTT assay 23558238
NON-PROTEIN TARGET IC50 = 8720.0 nM 5.06 Cytotoxicity against human A375-S2 cells after 48 hrs by MTT assay 23558238
U-937 IC50 = 11790.0 nM 4.93 Cytotoxicity against human U937 cells after 48 hrs by MTT assay 23558238
A549 IC50 = 13110.0 nM 4.88 Cytotoxicity against human A549 cells after 48 hrs by MTT assay 23558238
K562 IC50 = 16080.0 nM 4.79 Cytotoxicity against human K562 cells after 48 hrs by MTT assay 23558238
HCT-116 IC50 = 22960.0 nM 4.64 Cytotoxicity against human HCT116 cells after 48 hrs by MTT assay 23558238
HL-60 IC50 = 26810.0 nM 4.57 Cytotoxicity against human HL60 cells after 48 hrs by MTT assay 23558238

Literature References

PubMed DOI Target Context # Activities
23623417 10.1016/j.bmcl.2013.03.096 B16 3
23558238 10.1016/j.bmcl.2013.03.025 MCF7 1
32997496 10.1021/acs.jnatprod.0c00540 MT4 1
32997496 10.1021/acs.jnatprod.0c00540 Human immunodeficiency virus 1
32223193 10.1021/acs.jnatprod.0c00003 RKO 1
32223193 10.1021/acs.jnatprod.0c00003 SW-620 1
31860304 10.1021/acs.jnatprod.9b00993 Unchecked 1
31860304 10.1021/acs.jnatprod.9b00993 Human immunodeficiency virus 1 1
31860304 10.1021/acs.jnatprod.9b00993 MT4 1
23558238 10.1016/j.bmcl.2013.03.025 HeLa 1
6736968 10.1021/np50032a006 P388 1
23558238 10.1016/j.bmcl.2013.03.025 HepG2 1
23558238 10.1016/j.bmcl.2013.03.025 HCT-116 1
23558238 10.1016/j.bmcl.2013.03.025 A549 1
23558238 10.1016/j.bmcl.2013.03.025 NON-PROTEIN TARGET 1
23558238 10.1016/j.bmcl.2013.03.025 HT-1080 1
23558238 10.1016/j.bmcl.2013.03.025 HL-60 1
23558238 10.1016/j.bmcl.2013.03.025 U-937 1
23558238 10.1016/j.bmcl.2013.03.025 K562 1

Data from ChEMBL 36 via Core Engine